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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952024.1_cds_XP_016491870.1_82145
CDS Infomation

[gene=LOC107811457] [db_xref=GeneID:107811457] [protein=7-hydroxymethyl chlorophyll a reductase, chloroplastic-like] [protein_id=XP_016491870.1] [location=complement(join(10757..10847,10931..11025,11136..11200,11952..12009,12097..12166,12278..12357,13394..13421,13912..13973,14052..14087,15228..15325,16360..16422,16517..16568,22859..22937,23035..23076,23483..23567,23766..23877,24794..24878,25990..26080,26243..26312))] [gbkey=CDS]
Sequence

ATGGCGTTGCTCACTGGAAACCTCCCTTCTTTACCTTTCAACTTTTCCATTATTTCTTCT
TCATCACAAGAATCGAAAACAGTGAAACTTAGAGAAGATTGGAGGAAAAAATCACGACCT
ATTCCTCCTGGTGGGACTTATCCAGCTAAAGACCACTGCAGCCAATGTGGTTTGTGCGAC
TCTTACTACATTGCCCATGTCAAGAATGCATGTGCTTTCTTGGGGGATGGCATGTCTAGA
ATTGAAGCTTTGGAGCCTACTGTCCATGGACGAGGACGGAAAGAAGACTCGTTGGATGAG
ATTTATATGGGAGTGTATGAGAATCTGTTGTATGCTCGTAAAACGCAGCCTGTGGAAGGA
GCTCAATGGACGGGGATAGTGACAACTATTGCAGTGGAGATGCTAAAAGCTGGAATGGTG
GAAGCTGTTGTTTGTGTTCAGAGTGATCCGGAAGATCGATTTACTCCCCGACCTGTCCTG
GCAAGGACTCCAGAGGAAGTTATAGCAGCTAAAGGTGTCAAGCCAACACTGTCTCCTAAT
CTAAATACTCTCGCCTTAGTTGAGGCAGCTGGTGTGAAGCGACTTCTGTTCTGCGGTGTT
GGCTGCCAAGTGCAAGCTTTAAGATCAGTGGAGCAATATTTGAATTTGGATAAGCTATAT
GTTCTAGGCACTAACTGTGTGGATAATGGAAAACGAGAAGGCTTAGATAAGTTTCTGAAG
GCCGCTAGCAGTGAACCTGAAACAGTTCTTCACTATGAGTTTATGCAAGACTACAAGGTC
CATCTGAAGCATTTAGATGGCCATATTGAAGAGGTTCCCTATTTCTGTTTACCAGCAAAT
GAGTTAGTTGATGTTATTGCACCATCTTGTTACAGCTGTTTTGACTACACAAATGGCTTG
GCGGATTTGGTGGTGGGATACATGGGTGTACCAAAATATAGTGGAATCAGCATGATGCAG
CATCCGCAATATGTTACAGTCAGAAATGAACGTGGTAGAGAAATGCTAGGCCTTGTCGAG
AACCTTTTGGAAATTACTCCAACGATAAGTAGTGGTAACCGGCGTCCATTTGTCGTAGAA
ACCGTGAAGGCAGATGATGAAGCAAAATTTGGAAGAGGTCCTGCTCAACCTGCTCCAAAG
TTTGTTGGAAATTTAATTGCATTTTTTCTCAACATAGTCGGACCGAAGGGTCTAGAATTT
GCACGTTATTCACTAGATTACCACACAATCAGAAATTATTTAAATGTAGTCCGCAAGTGG
GGAAAGGAAAGAGCTGACAGACACATACCAGCATATGCAAAGAAAATTGTTAGCATGTAC
AATCAGAGTGGAGAAATTGATCAAATGCTTTCCAGCAAGTGA

Peptide Sequence

PEP ID

XP_016491870.1
PEP Infomation

PREDICTED: 7-hydroxymethyl chlorophyll a reductase, chloroplastic-like [Nicotiana tabacum]
Sequence

MALLTGNLPSLPFNFSIISSSSQESKTVKLREDWRKKSRPIPPGGTYPAKDHCSQCGLCD
SYYIAHVKNACAFLGDGMSRIEALEPTVHGRGRKEDSLDEIYMGVYENLLYARKTQPVEG
AQWTGIVTTIAVEMLKAGMVEAVVCVQSDPEDRFTPRPVLARTPEEVIAAKGVKPTLSPN
LNTLALVEAAGVKRLLFCGVGCQVQALRSVEQYLNLDKLYVLGTNCVDNGKREGLDKFLK
AASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNGL
ADLVVGYMGVPKYSGISMMQHPQYVTVRNERGREMLGLVENLLEITPTISSGNRRPFVVE
TVKADDEAKFGRGPAQPAPKFVGNLIAFFLNIVGPKGLEFARYSLDYHTIRNYLNVVRKW
GKERADRHIPAYAKKIVSMYNQSGEIDQMLSSK

Transcript Sequence

Gene sequence data has not been registered.